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Article Dans Une Revue Scientific Data Année : 2023

Open science resources from the Tara Pacific expedition across coral reef and surface ocean ecosystems

1 LOV - Laboratoire d'océanographie de Villefranche
2 GOSEE - Global Oceans Systems Ecology & Evolution - Tara Oceans
3 IUF - Institut universitaire de France
4 University of Maine
5 European Molecular Biology Laboratory [Hinxton]
6 Shimoda Marine Research Center
7 CRIOBE - Centre de recherches insulaires et observatoire de l'environnement
8 Nicholas School of the Environment
9 LEMAR - Laboratoire des Sciences de l'Environnement Marin (LEMAR)
10 IRCAN - Institut de Recherche sur le Cancer et le Vieillissement
11 IFR MARRES - Institut Fédératif de Recherche - Ressources Marines
12 LIA ROPSE - Laboratoire International Associé Réponse des Organismes et Populations face au Stress Environnemental - Université Côte d’Azur - Centre Scientifique de Monaco
13 LOMIC - Laboratoire d'Océanographie Microbienne
14 STAMAR - OSU Stations marines
15 GEOTRAC - Géochrononologie Traceurs Archéométrie
16 CYBIOM - Cycles biogéochimiques marins : processus et perturbations
17 Weizmann Institute of Science [Rehovot, Israël]
18 Universität Konstanz
19 Department of Earth Sciences [USC Los Angeles]
20 SBR - Station biologique de Roscoff = Roscoff Marine Station
21 MSI - Maison de la Modélisation, de la Simulation et des Interactions [Sophia-Antipolis]
22 OSU - Oregon State University
23 CONACYT-CIBNOR - Centro de Investigaciones Biologicas del Noroeste [Mexico]
24 UMR 8030 - Génomique métabolique
25 PROTEO - Processus et interactions de fine échelle océanique
26 Tara Ocean Foundation
27 IBENS - Institut de biologie de l'ENS Paris
28 LECOB - Laboratoire d'Ecogéochimie des environnements benthiques
29 CSM - Centre Scientifique de Monaco
30 OSU - Ohio State University [Columbus]
31 Institute of Microbiology and Swiss Institute of Bioinformatics
32 Martin Ryan Institute
Éric Douville
Benjamin C C Hume
Christian R Voolstra
Olivier P Thomas
Emmanuel Boss

Résumé

the Tara Pacific expedition (2016-2018) sampled coral ecosystems around 32 islands in the Pacific Ocean and the ocean surface waters at 249 locations, resulting in the collection of nearly 58 000 samples. The expedition was designed to systematically study warm-water coral reefs and included the collection of corals, fish, plankton, and seawater samples for advanced biogeochemical, molecular, and imaging analysis. Here we provide a complete description of the sampling methodology, and we explain how to explore and access the different datasets generated by the expedition. Environmental context data were obtained from taxonomic registries, gazetteers, almanacs, climatologies, operational biogeochemical models, and satellite observations. The quality of the different environmental measures has been validated not only by various quality control steps, but also through a global analysis allowing the comparison with known environmental large-scale structures. Such publicly released datasets open the perspective to address a wide range of scientific questions.
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Dates et versions

hal-04164118 , version 1 (18-07-2023)

Identifiants

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Fabien Lombard, Guillaume Bourdin, Stéphane Pesant, Sylvain Agostini, Alberto Baudena, et al.. Open science resources from the Tara Pacific expedition across coral reef and surface ocean ecosystems. Scientific Data , 2023, 10 (1), pp.324. ⟨10.1038/s41597-022-01757-w⟩. ⟨hal-04164118⟩
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