Poster De Conférence Année : 2022

ExploreMetabar : a user-friendly Shiny application to explore the drivers of microbial communities

Résumé

A free and easily accessible web application ; R package for local installation ; Use of phyloseq object (output from rANOMALY, FROGS) ; Interactive filters, to focus on a specific group of samples. Complete diversity analysis with advanced visualizations and statistical tests, differential analysis and more features. Metabarcoding is widely used for community composition studies of complex samples (food, gut, environement) ; Existing tools for the analysis of these data needs some coding knowledge. We present a Shiny application for metabarcoding data with interactive features allowing user to explore and analyse them.

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Dates et versions

hal-03800142 , version 1 (06-10-2022)

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  • HAL Id : hal-03800142 , version 1

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Étienne Rifa, Sébastien Theil. ExploreMetabar : a user-friendly Shiny application to explore the drivers of microbial communities. Club des bactéries lactiques (CBL 2022), Jun 2022, Nantes, France. . ⟨hal-03800142⟩
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