Draft Genome Sequence of the White-Rot Fungus Obba rivulosa 3A-2
S. Haridas
,
R. Albert
,
M. Binder
(1)
,
J. Bloem
,
Kurt Labutti
(2)
,
A. Salamov
(3)
,
B. Andreopoulos
,
S.E. Baker
,
Kerrie Barry
(4)
,
G. Bills
,
B.H. Bluhm
,
C. Cannon
,
R. Castanera
,
D.E. Culley
,
C. Daum
,
D. Ezra
,
J.B. González
,
Bernard Henrissat
(5)
,
A. Kuo
,
C. Liang
,
Anna Lipzen
,
F. Lutzoni
,
J. Magnuson
,
S.J. Mondo
,
M. Nolan
,
R.A. Ohm
,
J. Pangilinan
,
H.-J. Park
,
L. Ramírez
,
M. Alfaro
,
H. Sun
,
A. Tritt
,
Y. Yoshinaga
,
L.-H. Zwiers
,
B.G. Turgeon
,
S.B. Goodwin
,
J.W. Spatafora
,
P.W. Crous
,
I.V. Grigoriev
,
Thirumalaiselvi Ulaganathan
,
Rong Shi
,
Deqiang Yao
,
Ruo-Xu Gu
,
Marie-Line Garron
,
Maia Cherney
,
D Peter Tieleman
,
Eric Sterner
,
Guoyun Li
,
Lingyun Li
,
Robert Linhardt
,
Miroslaw Cygler
,
Niël van Wyk
,
Michel Drancourt
,
Laurent Kremer
,
Otto Miettinen
,
Robert Riley
,
Dan Cullen
,
Ronald de Vries
,
Matthieu Hainaut
(5)
,
Annele Hatakka
,
Kristiina Hildén
,
Rita Kuo
,
Miia Mäkelä
,
Laura Sandor
,
Joseph Spatafora
,
Igor Grigoriev
,
David Hibbett
S. Haridas
- Function : Author
R. Albert
- Function : Author
J. Bloem
- Function : Author
Kurt Labutti
- Function : Author
- PersonId : 758166
- ORCID : 0000-0002-5838-1972
B. Andreopoulos
- Function : Author
S.E. Baker
- Function : Author
Kerrie Barry
- Function : Author
- PersonId : 776761
- ORCID : 0000-0002-8999-6785
G. Bills
- Function : Author
B.H. Bluhm
- Function : Author
C. Cannon
- Function : Author
R. Castanera
- Function : Author
D.E. Culley
- Function : Author
C. Daum
- Function : Author
D. Ezra
- Function : Author
J.B. González
- Function : Author
Bernard Henrissat
- Function : Author
- PersonId : 833340
A. Kuo
- Function : Author
C. Liang
- Function : Author
Anna Lipzen
- Function : Author
- PersonId : 773817
- ORCID : 0000-0003-2293-9329
F. Lutzoni
- Function : Author
J. Magnuson
- Function : Author
S.J. Mondo
- Function : Author
M. Nolan
- Function : Author
- PersonId : 758023
- ORCID : 0000-0001-8316-0680
R.A. Ohm
- Function : Author
J. Pangilinan
- Function : Author
H.-J. Park
- Function : Author
L. Ramírez
- Function : Author
M. Alfaro
- Function : Author
H. Sun
- Function : Author
A. Tritt
- Function : Author
Y. Yoshinaga
- Function : Author
L.-H. Zwiers
- Function : Author
B.G. Turgeon
- Function : Author
S.B. Goodwin
- Function : Author
J.W. Spatafora
- Function : Author
P.W. Crous
- Function : Author
- PersonId : 780919
- ORCID : 0000-0001-9085-8825
- IdRef : 096309768
I.V. Grigoriev
- Function : Author
Thirumalaiselvi Ulaganathan
- Function : Author
Rong Shi
- Function : Author
Deqiang Yao
- Function : Author
Ruo-Xu Gu
- Function : Author
Marie-Line Garron
- Function : Author
Maia Cherney
- Function : Author
D Peter Tieleman
- Function : Author
Eric Sterner
- Function : Author
Guoyun Li
- Function : Author
Lingyun Li
- Function : Author
Robert Linhardt
- Function : Author
Miroslaw Cygler
- Function : Author
Niël van Wyk
- Function : Author
Michel Drancourt
- Function : Author
- PersonId : 182550
- IdHAL : michel-drancourt
- ORCID : 0000-0003-0768-1139
- IdRef : 060258411
Laurent Kremer
- Function : Author
Otto Miettinen
- Function : Author
- PersonId : 798146
- ORCID : 0000-0001-7502-710X
Robert Riley
- Function : Author
Dan Cullen
- Function : Author
Ronald de Vries
- Function : Author
Annele Hatakka
- Function : Author
Kristiina Hildén
- Function : Author
- PersonId : 776735
- ORCID : 0000-0002-0126-8186
Rita Kuo
- Function : Author
Miia Mäkelä
- Function : Author
Laura Sandor
- Function : Author
Joseph Spatafora
- Function : Author
Igor Grigoriev
- Function : Author
- PersonId : 791663
- ORCID : 0000-0002-3136-8903
- IdRef : 229928536
David Hibbett
- Function : Author
Abstract
ABSTRACT We report here the first genome sequence of the white-rot fungus Obba rivulosa (Polyporales, Basidiomycota), a polypore known for its lignin-decomposing ability. The genome is based on the homokaryon 3A-2 originating in Finland. The genome is typical in size and carbohydrate active enzyme (CAZy) content for wood-decomposing basidiomycetes.
Keywords
New taxa
Rhizodiscinaceae Crous
active site
crystal structure
heparin lyase
protein dynamics
substrate specificity
CAZy database
Mycobacterium tuberculosis
Rpfs
glycoside hydrolase
trehalose
Aulographales Crous
Spatafora
Haridas & Grigoriev
Coniosporiaceae Crous
Coniosporiales Crous
Eremomycetales Crous
Fungal evolution
Genome-based prediction
Lineolataceae Crous
Lineolatales Crous
Machine-learning