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Logiciel Année : 2014

MetaOMineR: a quantitative metagenomics data analyses pipeline

MetaOMineR : une pacquetage R pour l'analyse de données de métagénomique quantitative

Edi Prifti
Emmanuelle E. Le Chatelier

Résumé

MetaOMineR is a suite of R packages that offer through a large number of functions and modules the capability to analyse large quantitative metagenomics datasets. It is conceived for the analyses of whole NGS data but can be used for 16S datasets as well or other types of omics data. Developed since the beginning of the field the software has evolved and is structured around different modules such as preprocessing, analysis, visualisation, etc. It is used along with other data packages that contain the needed information to describe a given catalogue developed in the same series.
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Dates et versions

hal-02800484 , version 1 (05-06-2020)

Identifiants

  • HAL Id : hal-02800484 , version 1
  • PRODINRA : 278347

Citer

Edi Prifti, Emmanuelle E. Le Chatelier. MetaOMineR: a quantitative metagenomics data analyses pipeline. 2014. ⟨hal-02800484⟩

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