Simulation of RNA sequencIng with Oxford Nanopore Technologies - Archive ouverte HAL Accéder directement au contenu
Poster De Conférence Année : 2018

Simulation of RNA sequencIng with Oxford Nanopore Technologies

Résumé

Background Oxford Nanopore Technologies (ONT) platforms produce reads order of magnitudes longer than previous generation of sequencers such as Illumina (several tens to thousands of base pairs). The unprecedented long range information these reads provide is currently used to better solve genomic assembly. However, these sequences suffer from high error rates (com-monly above 10%) and complex error profiles: insertions and deletions are more common than in short reads and homopolymer regions are plagued by non stochastic errors due to the difficulty to estimate their length using ONT technology.
Fichier principal
Vignette du fichier
RNA_simulator.pdf (2.02 Mo) Télécharger le fichier
Origine : Fichiers produits par l'(les) auteur(s)
Loading...

Dates et versions

hal-01929917 , version 1 (21-11-2018)

Identifiants

  • HAL Id : hal-01929917 , version 1

Citer

Camille Marchet, Leandro Lima. Simulation of RNA sequencIng with Oxford Nanopore Technologies. JOBIM 2018 - Journées Ouvertes Biologie, Informatique et Mathématiques, Jul 2018, Marseille, France. pp.1-2. ⟨hal-01929917⟩
103 Consultations
129 Téléchargements

Partager

Gmail Facebook X LinkedIn More