<?xml version="1.0" encoding="utf-8"?>
<TEI xmlns="http://www.tei-c.org/ns/1.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xmlns:hal="http://hal.archives-ouvertes.fr/" xmlns:gml="http://www.opengis.net/gml/3.3/" xmlns:gmlce="http://www.opengis.net/gml/3.3/ce" version="1.1" xsi:schemaLocation="http://www.tei-c.org/ns/1.0 http://api.archives-ouvertes.fr/documents/aofr-sword.xsd">
  <teiHeader>
    <fileDesc>
      <titleStmt>
        <title>HAL TEI export of hal-01907110</title>
      </titleStmt>
      <publicationStmt>
        <distributor>CCSD</distributor>
        <availability status="restricted">
          <licence target="https://creativecommons.org/publicdomain/zero/1.0/">CC0 1.0 - Universal</licence>
        </availability>
        <date when="2026-05-25T21:37:09+02:00"/>
      </publicationStmt>
      <sourceDesc>
        <p part="N">HAL API Platform</p>
      </sourceDesc>
    </fileDesc>
  </teiHeader>
  <text>
    <body>
      <listBibl>
        <biblFull>
          <titleStmt>
            <title xml:lang="en">Isolation and characterisation of 16 polymorphic microsatellite loci for the sooty tern (Onychoprion fuscatus; Sternidae), a super-abundant pan-tropical seabird, including a test of cross-species amplification using two noddies (Anous spp.)</title>
            <author role="aut">
              <persName>
                <forename type="first">D. K.</forename>
                <surname>Danckwerts</surname>
              </persName>
              <email type="md5">824221debbbd89c8ff948cc98923fc64</email>
              <email type="domain">gmail.com</email>
              <idno type="idhal" notation="numeric">981424</idno>
              <idno type="halauthorid" notation="string">1022255-981424</idno>
              <affiliation ref="#struct-407809"/>
            </author>
            <author role="aut">
              <persName>
                <forename type="first">Camille</forename>
                <surname>Lebarbenchon</surname>
              </persName>
              <email type="md5">1f2cebfca419c296b4f285f61a673212</email>
              <email type="domain">univ-reunion.fr</email>
              <idno type="idhal" notation="string">camille-lebarbenchon</idno>
              <idno type="idhal" notation="numeric">12421</idno>
              <idno type="halauthorid" notation="string">29299-12421</idno>
              <idno type="RESEARCHERID">http://www.researcherid.com/rid/H-7245-2013</idno>
              <idno type="ORCID">https://orcid.org/0000-0002-0922-7573</idno>
              <idno type="GOOGLE SCHOLAR">https://scholar.google.com/citations?user=3hOnG_0AAAAJ</idno>
              <idno type="IDREF">https://www.idref.fr/129355852</idno>
              <idno type="RESEARCHERID">http://www.researcherid.com/rid/http://www.researcherid.com/rid/H-7245-2013</idno>
              <affiliation ref="#struct-418783"/>
            </author>
            <author role="aut">
              <persName>
                <forename type="first">Matthieu</forename>
                <surname>Le Corre</surname>
              </persName>
              <email type="md5">1399a7c8a3f26f336bb404d5cc35568f</email>
              <email type="domain">univ-reunion.fr</email>
              <idno type="idhal" notation="string">matthieu-le-corre</idno>
              <idno type="idhal" notation="numeric">174240</idno>
              <idno type="halauthorid" notation="string">11414-174240</idno>
              <idno type="IDREF">https://www.idref.fr/158752007</idno>
              <idno type="ORCID">https://orcid.org/0000-0002-8372-9440</idno>
              <idno type="ORCID">https://orcid.org/0000-0002-1194-351X</idno>
              <affiliation ref="#struct-418794"/>
            </author>
            <author role="aut">
              <persName>
                <forename type="first">Laurence</forename>
                <surname>Humeau</surname>
              </persName>
              <email type="md5">bf3a7292d1fa9fdfdf4225cae965b26e</email>
              <email type="domain">univ-reunion.fr</email>
              <idno type="idhal" notation="string">laurence-humeau</idno>
              <idno type="idhal" notation="numeric">970239</idno>
              <idno type="halauthorid" notation="string">943480-970239</idno>
              <idno type="GOOGLE SCHOLAR">FCbiSaUAAAAJ&amp;hl=fr</idno>
              <affiliation ref="#struct-16786"/>
            </author>
            <editor role="depositor">
              <persName>
                <forename>Réunion</forename>
                <surname>Univ</surname>
              </persName>
              <email type="md5">fcc6f146feaf44b21f9d6255bbfcdc9f</email>
              <email type="domain">univ-reunion.fr</email>
            </editor>
          </titleStmt>
          <editionStmt>
            <edition n="v1" type="current">
              <date type="whenSubmitted">2018-10-28 13:59:26</date>
              <date type="whenModified">2025-03-28 17:38:08</date>
              <date type="whenReleased">2018-10-28 13:59:26</date>
              <date type="whenProduced">2017-08-01</date>
            </edition>
            <respStmt>
              <resp>contributor</resp>
              <name key="313340">
                <persName>
                  <forename>Réunion</forename>
                  <surname>Univ</surname>
                </persName>
                <email type="md5">fcc6f146feaf44b21f9d6255bbfcdc9f</email>
                <email type="domain">univ-reunion.fr</email>
              </name>
            </respStmt>
          </editionStmt>
          <publicationStmt>
            <distributor>CCSD</distributor>
            <idno type="halId">hal-01907110</idno>
            <idno type="halUri">https://univ-reunion.hal.science/hal-01907110</idno>
            <idno type="halBibtex">danckwerts:hal-01907110</idno>
            <idno type="halRefHtml">&lt;i&gt;Marine Biodiversity Records&lt;/i&gt;, 2017, &lt;a target="_blank" href="https://dx.doi.org/10.1007/s12526-017-0773-5"&gt;&amp;#x27E8;10.1007/s12526-017-0773-5&amp;#x27E9;&lt;/a&gt;</idno>
            <idno type="halRef">Marine Biodiversity Records, 2017, &amp;#x27E8;10.1007/s12526-017-0773-5&amp;#x27E9;</idno>
            <availability status="restricted"/>
          </publicationStmt>
          <seriesStmt>
            <idno type="stamp" n="CIRAD">CIRAD - Centre de coopération internationale en recherche agronomique pour le développement</idno>
            <idno type="stamp" n="AFRIQ">HAL-Francophonie, Afrique et océan indien</idno>
            <idno type="stamp" n="CNRS">CNRS - Centre national de la recherche scientifique</idno>
            <idno type="stamp" n="UNIV-REUNION">Université de la Réunion</idno>
            <idno type="stamp" n="INRA">INRA - Institut national de la recherche agronomique</idno>
            <idno type="stamp" n="PVBMT" corresp="UNIV-REUNION">Peuplements végétaux et bioagresseurs en milieu tropical</idno>
            <idno type="stamp" n="PIMIT" corresp="UNIV-REUNION">UMR PIMIT - Processus Infectieux en Milieu Insulaire Tropical</idno>
            <idno type="stamp" n="ENTROPIE" corresp="UNIV-REUNION">Ecologie marine tropicale dans les océans pacifique et indien</idno>
            <idno type="stamp" n="AGROPOLIS">Agropolis</idno>
            <idno type="stamp" n="AGREENIUM">Archive ouverte en agrobiosciences</idno>
            <idno type="stamp" n="FST-REUNION">UFR Sciences et technologies - Université de La Réunion</idno>
            <idno type="stamp" n="INRAE">Institut National de Recherche en Agriculture, Alimentation et Environnement</idno>
            <idno type="stamp" n="TEST3-HALCNRS">TEST3-HALCNRS</idno>
            <idno type="stamp" n="TEST4-HALCNRS">collection test</idno>
            <idno type="stamp" n="TEST5-HALCNRS">collection test 5</idno>
          </seriesStmt>
          <notesStmt>
            <note type="audience" n="2">International</note>
            <note type="popular" n="0">No</note>
            <note type="peer" n="1">Yes</note>
          </notesStmt>
          <sourceDesc>
            <biblStruct>
              <analytic>
                <title xml:lang="en">Isolation and characterisation of 16 polymorphic microsatellite loci for the sooty tern (Onychoprion fuscatus; Sternidae), a super-abundant pan-tropical seabird, including a test of cross-species amplification using two noddies (Anous spp.)</title>
                <author role="aut">
                  <persName>
                    <forename type="first">D. K.</forename>
                    <surname>Danckwerts</surname>
                  </persName>
                  <email type="md5">824221debbbd89c8ff948cc98923fc64</email>
                  <email type="domain">gmail.com</email>
                  <idno type="idhal" notation="numeric">981424</idno>
                  <idno type="halauthorid" notation="string">1022255-981424</idno>
                  <affiliation ref="#struct-407809"/>
                </author>
                <author role="aut">
                  <persName>
                    <forename type="first">Camille</forename>
                    <surname>Lebarbenchon</surname>
                  </persName>
                  <email type="md5">1f2cebfca419c296b4f285f61a673212</email>
                  <email type="domain">univ-reunion.fr</email>
                  <idno type="idhal" notation="string">camille-lebarbenchon</idno>
                  <idno type="idhal" notation="numeric">12421</idno>
                  <idno type="halauthorid" notation="string">29299-12421</idno>
                  <idno type="RESEARCHERID">http://www.researcherid.com/rid/H-7245-2013</idno>
                  <idno type="ORCID">https://orcid.org/0000-0002-0922-7573</idno>
                  <idno type="GOOGLE SCHOLAR">https://scholar.google.com/citations?user=3hOnG_0AAAAJ</idno>
                  <idno type="IDREF">https://www.idref.fr/129355852</idno>
                  <idno type="RESEARCHERID">http://www.researcherid.com/rid/http://www.researcherid.com/rid/H-7245-2013</idno>
                  <affiliation ref="#struct-418783"/>
                </author>
                <author role="aut">
                  <persName>
                    <forename type="first">Matthieu</forename>
                    <surname>Le Corre</surname>
                  </persName>
                  <email type="md5">1399a7c8a3f26f336bb404d5cc35568f</email>
                  <email type="domain">univ-reunion.fr</email>
                  <idno type="idhal" notation="string">matthieu-le-corre</idno>
                  <idno type="idhal" notation="numeric">174240</idno>
                  <idno type="halauthorid" notation="string">11414-174240</idno>
                  <idno type="IDREF">https://www.idref.fr/158752007</idno>
                  <idno type="ORCID">https://orcid.org/0000-0002-8372-9440</idno>
                  <idno type="ORCID">https://orcid.org/0000-0002-1194-351X</idno>
                  <affiliation ref="#struct-418794"/>
                </author>
                <author role="aut">
                  <persName>
                    <forename type="first">Laurence</forename>
                    <surname>Humeau</surname>
                  </persName>
                  <email type="md5">bf3a7292d1fa9fdfdf4225cae965b26e</email>
                  <email type="domain">univ-reunion.fr</email>
                  <idno type="idhal" notation="string">laurence-humeau</idno>
                  <idno type="idhal" notation="numeric">970239</idno>
                  <idno type="halauthorid" notation="string">943480-970239</idno>
                  <idno type="GOOGLE SCHOLAR">FCbiSaUAAAAJ&amp;hl=fr</idno>
                  <affiliation ref="#struct-16786"/>
                </author>
              </analytic>
              <monogr>
                <idno type="halJournalId" status="VALID">59770</idno>
                <idno type="issn">1755-2672</idno>
                <title level="j">Marine Biodiversity Records</title>
                <imprint>
                  <publisher>Cambridge University Press</publisher>
                  <date type="datePub">2017-08-01</date>
                </imprint>
              </monogr>
              <idno type="doi">10.1007/s12526-017-0773-5</idno>
            </biblStruct>
          </sourceDesc>
          <profileDesc>
            <langUsage>
              <language ident="en">English</language>
            </langUsage>
            <textClass>
              <keywords scheme="author">
                <term xml:lang="en">Population genetics</term>
                <term xml:lang="en">Conservation</term>
                <term xml:lang="en">Microsatellite</term>
                <term xml:lang="en">Sternidae</term>
                <term xml:lang="en">Anous</term>
                <term xml:lang="en">Onychoprion fuscatus</term>
                <term xml:lang="en">Sooty tern</term>
              </keywords>
              <classCode scheme="halDomain" n="sdv">Life Sciences [q-bio]</classCode>
              <classCode scheme="halTypology" n="ART">Journal articles</classCode>
              <classCode scheme="halOldTypology" n="ART">Journal articles</classCode>
              <classCode scheme="halTreeTypology" n="ART">Journal articles</classCode>
            </textClass>
            <abstract xml:lang="en">
              <p>We isolate and characterise 16 polymorphic microsatellite loci for the super-abundant, pan-tropical sooty tern (Onychoprion fuscatus), facilitating population genetic studies. In 70 samples from two breeding colonies, the total number of alleles per locus ranged between 5 and 21, observed heterozygosity ranged from 0.143 to 0.942, while estimated null allele frequency varied from −0.131 to 0.273. Polymerase chain reaction (PCR) conditions were optimised across loci, enabling multiplexing and rapid multilocus genotyping. These 16 loci will be useful for future studies of genetic diversity and population structure, and can be used as a proxy through which to assess ecosystem function and change. We additionally test cross-species amplification in the brown (Anous stolidus) and lesser (A. tenuirostris) noddies, illustrating a use of these microsatellites in other related Sternidae species.</p>
            </abstract>
          </profileDesc>
        </biblFull>
      </listBibl>
    </body>
    <back>
      <listOrg type="structures">
        <org type="institution" xml:id="struct-407809" status="VALID">
          <idno type="ROR">https://ror.org/016sewp10</idno>
          <orgName>Rhodes University  [Grahamstown]</orgName>
          <desc>
            <address>
              <addrLine>PO Box 94Makhanda 6140Eastern Cape</addrLine>
              <country key="ZA"/>
            </address>
            <ref type="url">https://www.ru.ac.za/</ref>
          </desc>
        </org>
        <org type="laboratory" xml:id="struct-418783" status="VALID">
          <idno type="IdRef">191843024</idno>
          <idno type="RNSR">201521693U</idno>
          <idno type="ROR">https://ror.org/05fnxds15</idno>
          <orgName>Processus Infectieux en Milieu Insulaire Tropical</orgName>
          <orgName type="acronym">PIMIT</orgName>
          <date type="start">2015-01-01</date>
          <desc>
            <address>
              <addrLine>Plateforme de recherche CYROI - 2 rue Maxime-Rivière 97491 Sainte Clotilde - La Réunion</addrLine>
              <country key="RE"/>
            </address>
            <ref type="url">https://pimit.univ-reunion.fr/</ref>
          </desc>
          <listRelation>
            <relation name="UM134" active="#struct-300316" type="direct"/>
            <relation name="U1187" active="#struct-303623" type="direct"/>
            <relation name="UMR249" active="#struct-365853" type="direct"/>
            <relation name="UMR9192" active="#struct-441569" type="direct"/>
          </listRelation>
        </org>
        <org type="laboratory" xml:id="struct-418794" status="VALID">
          <idno type="IdRef">18597077X</idno>
          <idno type="RNSR">201521701C</idno>
          <idno type="ROR">https://ror.org/05kxt4539</idno>
          <orgName>Ecologie marine tropicale dans les Océans Pacifique et Indien</orgName>
          <orgName type="acronym">ENTROPIE [Réunion]</orgName>
          <date type="start">2015-01-01</date>
          <desc>
            <address>
              <addrLine>UNIVERSITE DE LA REUNIONFaculté des Sciences et Technolo15 Avenue René CasinBP 9200397744 ST DENIS CEDEX 9</addrLine>
              <country key="FR"/>
            </address>
            <ref type="url">http://umr-entropie.ird.nc</ref>
          </desc>
          <listRelation>
            <relation active="#struct-67872" type="direct"/>
            <relation active="#struct-300316" type="direct"/>
            <relation name="UMR9220" active="#struct-441569" type="direct"/>
          </listRelation>
        </org>
        <org type="laboratory" xml:id="struct-16786" status="OLD">
          <idno type="RNSR">200617341C</idno>
          <orgName>Peuplements végétaux et bioagresseurs en milieu tropical</orgName>
          <orgName type="acronym">UMR PVBMT</orgName>
          <date type="start">2003-01-01</date>
          <date type="end">2019-12-31</date>
          <desc>
            <address>
              <addrLine>Faculté des Sciences et techniques - Université de La Réunion 15 avenue René Cassin CS92003 97744 Saint-Denis Cédex 9 pour le Cirad Station de Ligne-Paradis - 7 chemin de l'IRAT - 97410 Saint-Pierre</addrLine>
              <country key="RE"/>
            </address>
            <ref type="url">http://umr-pvbmt.cirad.fr</ref>
          </desc>
          <listRelation>
            <relation name="UMR53-2009" active="#struct-11574" type="direct"/>
            <relation active="#struct-67872" type="direct"/>
            <relation name="USC1424 " active="#struct-92114" type="direct"/>
            <relation name="UMRC53" active="#struct-300316" type="direct"/>
          </listRelation>
        </org>
        <org type="institution" xml:id="struct-300316" status="VALID">
          <idno type="IdRef">026404451</idno>
          <idno type="ISNI">0000000121112608</idno>
          <idno type="ROR">https://ror.org/005ypkf75</idno>
          <orgName>Université de La Réunion</orgName>
          <orgName type="acronym">UR</orgName>
          <date type="start">1982-10-15</date>
          <desc>
            <address>
              <addrLine>15, avenue René Cassin - CS92003 -97744 Saint Denis Cedex 9</addrLine>
              <country key="RE"/>
            </address>
            <ref type="url">http://www.univ-reunion.fr</ref>
          </desc>
        </org>
        <org type="institution" xml:id="struct-303623" status="VALID">
          <idno type="IdRef">026388278</idno>
          <idno type="ROR">https://ror.org/02vjkv261</idno>
          <orgName>Institut National de la Santé et de la Recherche Médicale</orgName>
          <orgName type="acronym">INSERM</orgName>
          <desc>
            <address>
              <addrLine>101, rue de Tolbiac, 75013 Paris</addrLine>
              <country key="FR"/>
            </address>
            <ref type="url">http://www.inserm.fr</ref>
          </desc>
        </org>
        <org type="institution" xml:id="struct-365853" status="INCOMING">
          <orgName>IRD</orgName>
          <desc>
            <address>
              <country key="FR"/>
            </address>
          </desc>
        </org>
        <org type="regroupinstitution" xml:id="struct-441569" status="VALID">
          <idno type="IdRef">02636817X</idno>
          <idno type="ISNI">0000000122597504</idno>
          <idno type="ROR">https://ror.org/02feahw73</idno>
          <orgName>Centre National de la Recherche Scientifique</orgName>
          <orgName type="acronym">CNRS</orgName>
          <date type="start">1939-10-19</date>
          <desc>
            <address>
              <country key="FR"/>
            </address>
            <ref type="url">https://www.cnrs.fr/</ref>
          </desc>
        </org>
        <org type="institution" xml:id="struct-67872" status="VALID">
          <idno type="IdRef">050165224</idno>
          <idno type="ROR">https://ror.org/05q3vnk25</idno>
          <orgName>Institut de Recherche pour le Développement</orgName>
          <orgName type="acronym">IRD</orgName>
          <desc>
            <address>
              <addrLine>SiègeLe Sextant 44, bd de DunkerqueCS 9000913572 Marseille cedex 02</addrLine>
              <country key="FR"/>
            </address>
            <ref type="url">http://www.ird.fr/</ref>
          </desc>
        </org>
        <org type="institution" xml:id="struct-11574" status="VALID">
          <idno type="ISNI">0000000121539871</idno>
          <idno type="ROR">https://ror.org/05kpkpg04</idno>
          <orgName>Centre de Coopération Internationale en Recherche Agronomique pour le Développement</orgName>
          <orgName type="acronym">Cirad</orgName>
          <date type="start">1984-06-01</date>
          <desc>
            <address>
              <addrLine>Siège 42, rue Scheffer 75116 Paris</addrLine>
              <country key="FR"/>
            </address>
            <ref type="url">http://www.cirad.fr</ref>
          </desc>
        </org>
        <org type="institution" xml:id="struct-92114" status="OLD">
          <idno type="ROR">https://ror.org/01x3gbx83</idno>
          <orgName>Institut National de la Recherche Agronomique</orgName>
          <orgName type="acronym">INRA</orgName>
          <date type="start">1946-05-18</date>
          <date type="end">2019-12-31</date>
          <desc>
            <address>
              <country key="FR"/>
            </address>
            <ref type="url">http://www.inra.fr</ref>
          </desc>
        </org>
      </listOrg>
    </back>
  </text>
</TEI>