Preprints, Working Papers, ... Year : 2018

Reconstructing Latent Orderings by Spectral Clustering

Abstract

Spectral clustering uses a graph Laplacian spectral embedding to enhance the cluster structure of some data sets. When the embedding is one dimensional, it can be used to sort the items (spectral ordering). A number of empirical results also suggests that a multidimensional Laplacian embedding enhances the latent ordering of the data, if any. This also extends to circular orderings, a case where unidimensional embeddings fail. We tackle the task of retrieving linear and circular orderings in a unifying framework, and show how a latent ordering on the data translates into a filamentary structure on the Laplacian embedding. We propose a method to recover it, illustrated with numerical experiments on synthetic data and real DNA sequencing data. The code and experiments are available at https://github.com/antrec/mdso.

Dates and versions

hal-01846269 , version 1 (21-07-2018)

Identifiers

Cite

Antoine Recanati, Thomas Kerdreux, Alexandre d'Aspremont. Reconstructing Latent Orderings by Spectral Clustering. 2018. ⟨hal-01846269⟩
149 View
0 Download

Altmetric

Share

More