Parallel Implementation of the Wu-Manber Algorithm Using the OpenCL Framework - Archive ouverte HAL Accéder directement au contenu
Communication Dans Un Congrès Année : 2012

Parallel Implementation of the Wu-Manber Algorithm Using the OpenCL Framework

Résumé

One of the most significant issues of the computational biology is the multiple pattern matching for locating nucleotides and amino acid sequence patterns into biological databases. Sequential implementations for these processes have become inadequate, due to an increasing demand for more computational power. Graphic cards offer a high parallelism computational power improving the performance of applications. This paper evaluates the performance of the Wu-Manber algorithm implemented with the OpenCL framework, by presenting the running time of the experiments compared with the corresponding sequential time.
Fichier principal
Vignette du fichier
978-3-642-33412-2_59_Chapter.pdf (134.4 Ko) Télécharger le fichier
Origine : Fichiers produits par l'(les) auteur(s)
Loading...

Dates et versions

hal-01523087 , version 1 (16-05-2017)

Licence

Paternité

Identifiants

Citer

Themistoklis K. Pyrgiotis, Charalampos S. Kouzinopoulos, Konstantinos G. Margaritis. Parallel Implementation of the Wu-Manber Algorithm Using the OpenCL Framework. 8th International Conference on Artificial Intelligence Applications and Innovations (AIAI), Sep 2012, Halkidiki, Greece. pp.576-583, ⟨10.1007/978-3-642-33412-2_59⟩. ⟨hal-01523087⟩
97 Consultations
214 Téléchargements

Altmetric

Partager

Gmail Facebook X LinkedIn More