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Journal Articles Bioinformatics Year : 2016

MorphoLibJ: integrated library and plugins for mathematical morphology with ImageJ

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Abstract

Motivation: Mathematical morphology (MM) provides many powerful operators for processing 2D and 3D images. However, most MM plugins currently implemented for the popular ImageJ/Fiji platform are limited to the processing of 2D images. Results: The MorphoLibJ library proposes a large collection of generic tools based on MM to process binary and grey-level 2D and 3D images, integrated into user-friendly plugins. We illustrate how MorphoLibJ can facilitate the exploitation of 3D images of plant tissues. Availability and Implementation: MorphoLibJ is freely available at http://imagej.net/MorphoLibJ

Dates and versions

hal-01438611 , version 1 (17-01-2017)

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Cite

David Legland, Ignacio Arganda Carreras, Philippe Andrey. MorphoLibJ: integrated library and plugins for mathematical morphology with ImageJ. Bioinformatics, 2016, 32 (22), pp.3532-3534. ⟨10.1093/bioinformatics/btw413⟩. ⟨hal-01438611⟩
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