Relationship between the Reprogramming Determinants of Boolean Networks and their Interaction Graph - Archive ouverte HAL Accéder directement au contenu
Communication Dans Un Congrès Année : 2016

Relationship between the Reprogramming Determinants of Boolean Networks and their Interaction Graph

Résumé

In this paper, we address the formal characterization of targets triggering cellular trans-differentiation in the scope of Boolean networks with asynchronous dynamics. Given two fixed points of a Boolean network, we are interested in all the combinations of mutations which allow to switch from one fixed point to the other, either possibly, or inevitably. In the case of existential reachability, we prove that the set of nodes to (permanently) flip are only and necessarily in certain connected components of the interaction graph. In the case of inevitable reachabil-ity, we provide an algorithm to identify a subset of possible solutions.
Fichier principal
Vignette du fichier
HSB16_preprint.pdf (341.58 Ko) Télécharger le fichier
Origine : Fichiers produits par l'(les) auteur(s)
Loading...

Dates et versions

hal-01354079 , version 1 (17-08-2016)

Identifiants

Citer

Hugues Mandon, Stefan Haar, Loïc Paulevé. Relationship between the Reprogramming Determinants of Boolean Networks and their Interaction Graph. Fifth International Workshop on Hybrid Systems Biology (HSB 2016), Oct 2016, Grenoble, France. pp.113-127, ⟨10.1007/978-3-319-47151-8_8⟩. ⟨hal-01354079⟩
412 Consultations
110 Téléchargements

Altmetric

Partager

Gmail Facebook X LinkedIn More