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["species","stress","organe","T","Analyses","P","M","study type",null,"authors","year","Title"]
["Populus","drought","Leaf","T","microarray",null,"M",null,"Brosché M, B Vinocur, ER Alatalo, A Lamminmaki, T Teichmann, EA Ottow, D Djilianov, D Afif, MB Bogeat-Triboulot, A Altman, A Polle, E Dreyer, S Rudd, P Lars, P Auvinen, J Kangasjärvi (2005) Gene expression and metabolite profiling of Populus euphratica growing in the Negev desert. Genome Biol 6:R101","Brosché M. et al. ",2005," Gene expression and metabolite profiling of populus euphratica growing in the negev desert. "]
["Populus","drought","Leaf","T","microarray",{"$nulls":3},"Street NR, O Skogstrom, J Tucker, M Rodriguez-Acosta, P Nilsson, S Jansson, G Taylor (2006) The genetics and genomics of the drought response in Populus. Plant J 48:321-341","Street N. R. et al. ",2006," The genetics and genomics of the drought response in populus. "]
["Populus","drought","Leaf, Root","T","microarray","P","M",null,"Bogeat-Triboulot MB, M Brosche, J Renaut, L Jouve, D Le Thiec, P Fayyaz, B Vinocur, E Witters, K Laukens, T Teichmann, A Altman, JF Hausman, A Polle, J Kangasjarvi, E Dreyer (2007) Gradual soil water depletion results in reversible changes of gene expression, protein profiles, ecophysiology, and growth performance in Populus euphratica, a poplar growing in arid regions. Plant Physiol 143:876-892","Bogeat-Triboulot M. B. et al. ",2007," Gradual soil water depletion results in reversible changes of gene expression, protein profiles, ecophysiology, and growth performance in populus euphratica, a poplar growing in arid regions. "]
["Populus","drought","Leaf","T","dot blot",{"$nulls":3},"Caruso A, F Chefdor, S Carpin, C Depierreux, FM Delmotte, G Kahlem, D Morabito (2008) Physiological characterization and identification of genes differentially expressed in response to drought induced by PEG 6000 in Populus canadensis leaves. J Plant Physiol 165:932-941","Caruso A. et al. ",2008," Physiological characterization and identification of genes differentially expressed in response to drought induced by peg 6000 in populus canadensis leaves. "]
["Populus","drought","Leaf","T","microarray",null,null,"comparative","Wilkins O, L Waldron, H Nahal, NJ Provart, MM Campbell (2009) Genotype and time of day shape the Populus drought response. Plant J 60:703-715","Wilkins O. et al. ",2009," Genotype and time of day shape the populus drought response. "]
["Populus","drought","Leaf",null,null,"P",null,"comparative","Bonhomme L, R Monclus, D Vincent, S Carpin, AM Lomenech, C Plomion, F Brignolas, D Morabito (2009) Leaf proteome analysis of eight Populus xeuramericana genotypes: Genetic variation in drought response and in water-use efficiency involves photosynthesis-related proteins. Proteomics 9:4121-4142. doi: 10.1002/pmic.200900047","Bonhomme L. et al. ",2009," Leaf proteome analysis of eight populus xeuramericana genotypes: Genetic variation in drought response and in water-use efficiency involves photosynthesis-related proteins. "]
["Populus","drought","Leaf",null,null,"P",null,"comparative","Bonhomme L, R Monclus, D Vincent, S Carpin, S Claverol, AM Lomenech, V Labas, C Plomion, F Brignolas, D Morabito (2009) Genetic variation and drought response in two Populus x euramericana genotypes through 2-DE proteomic analysis of leaves from field and glasshouse cultivated plants. Phytochemistry 70:988-1002. doi: 10.1016/j.phytochem.2009.05.013","Bonhomme L. et al. ",2009," Genetic variation and drought response in two populus x euramericana genotypes through 2-de proteomic analysis of leaves from field and glasshouse cultivated plants. "]
["Populus","drought","Leaf",null,null,"P",null,"comparative","Xiao X, F Yang, S Zhang, H Korpelainen, C Li (2009) Physiological and proteomic responses of two contrasting Populus cathayana populations to drought stress. Physiol Plant 136:150-168. doi: 10.1111/j.1399-3054.2009.01222.x","Xiao X. et al.",2009," Physiological and proteomic responses of two contrasting populus cathayana populations to drought stress. "]
["Populus","drought","Leaf, Root","T","microarray",null,null,"comparative","Cohen D, MB Bogeat-Triboulot, E Tisserant, S Balzergue, ML Martin-Magniette, G Lelandais, N Ningre, JP Renou, JP Tamby, D Le Thiec, I Hummel (2010) Comparative transcriptomics of drought responses in Populus: a meta-analysis of genome-wide expression profiling in mature leaves and root apices across two genotypes. BMC Genomics 11:630","Cohen D. et al. ",2010," Comparative transcriptomics of drought responses in populus: A meta-analysis of genome-wide expression profiling in mature leaves and root apices across two genotypes. "]
["Populus","drought","Leaf","T","microarray",null,null,"comparative","Hamanishi ET, S Raj, O Wilkins, BR Thomas, SD Mansfield, AL Plant, MM Campbell (2010) Intraspecific variation in the Populus balsamifera drought transcriptome. Plant Cell Environ 33:1742-1755","Hamanishi E. T. et al. ",2010," Intraspecific variation in the Populus balsamifera drought transcriptome. "]
["Populus","drought","Cambium","T","microarray",{"$nulls":3},"Berta M, A Giovannelli, F Sebastiani, A Camussi, ML Racchi (2010) Transcriptome changes in the cambial region of poplar (Populus alba L.) in response to water deficit. Plant Biology 12:341-354","Berta M. et al. ",2010,"Transcriptome changes in the cambial region of poplar (populus alba l.) in response to water deficit. "]
["Populus","drought","Leaf","T","RNAseq/ miRNA",{"$nulls":3},"Li BS, YR Qin, H Duan, WL Yin, XL Xia (2011) Genome-wide characterization of new and drought stress responsive microRNAs in Populus euphratica. J Exp Bot 62:3765-3779. doi: 10.1093/jxb/err051","Li B. et al.",2011,"Genome-wide characterization of new and drought stress responsive microRNAs in Populus euphratica"]
["Populus","drought","Plantlet","T","RNAseq/ miRNA",{"$nulls":3},"Ren YY, L Chen, YY Zhang, XY Kang, ZY Zhang, YW Wang (2012) Identification of novel and conserved Populus tomentosa microRNA as components of a response to water stress. Funct Integr Genomics 12:327-339. doi: 10.1007/s10142-012-0271-6","Ren Y. et al.",2012,"Identification of novel and conserved Populus tomentosa microRNA as components of a response to water stress"]
["Populus","drought","Leaf","T","microarray",{"$nulls":3},"Yan DH, T Fenning, S Tang, X Xia, W Yin (2012) Genome-wide transcriptional response of Populus euphratica to long-term drought stress. Plant Sci 195:24-35. doi: 10.1016/j.plantsci.2012.06.005","Yan DH. et al",2012,"Genome-wide transcriptional response of Populus euphratica to long-term drought stress"]
["Populus","drought","Leaf","T","microarray",{"$nulls":3},"Chen JH, YP Song, H Zhang, DQ Zhang (2013) Genome-Wide Analysis of Gene Expression in Response to Drought Stress in Populus simonii. Plant Mol Biol Rep 31:946-962. doi: 10.1007/s11105-013-0563-6","Chen J. H. et al. ",2013," Genome-wide analysis of gene expression in response to drought stress in populus simonii. "]
["Populus","drought","Root","T","microarray",{"$nulls":3},"Kopecky D, I Matusikova, AH Sziderics, F Trognitz, N Spiess, M Stierschneider, S Fluch (2013) In silico search for drought-responsive genes in plants on the basis of scientific data: case study on poplar roots. Acta Physiol Plant 35:1955-1966. doi: 10.1007/s11738-013-1234-9","Kopecky D. et al.",2013,"In silico search for drought-responsive genes in plants on the basis of scientific data: case study on poplar roots"]
["Populus","drought","Leaf","T","RNAseq",{"$nulls":3},"Cossu RM, T Giordani, A Cavallini, L Natali (2014) High-throughput analysis of transcriptome variation during water deficit in a poplar hybrid: a general overview. Tree Genet Genomes 10:53-66. doi: 10.1007/s11295-013-0661-5","Cossu R. M. et al. ",2014," High-throughput analysis of transcriptome variation during water deficit in a poplar hybrid: A general overview. "]
["Populus","drought","Leaf","T","RNAseq",{"$nulls":3},"Tang S, Y Dong, D Liang, Z Zhang, C-Y Ye, P Shuai, X Han, Y Zhao, W Yin, X Xia (2014) Analysis of the Drought Stress-Responsive Transcriptome of Black Cottonwood (Populus trichocarpa) Using Deep RNA Sequencing. Plant Mol Biol Rep  10.1007/s11105-014-0759-4:1-15. doi: 10.1007/s11105-014-0759-4","Tang S. et al.",2014,"Analysis of the Drought Stress-Responsive Transcriptome of Black Cottonwood (Populus trichocarpa) Using Deep RNA Sequencing"]
["Populus","NaCl, drought","Leaf","T","microarray",null,"M","comparative","Janz D, K Behnke, JP Schnitzler, B Kanawati, P Schmitt-Kopplin, A Polle (2010) Pathway analysis of the transcriptome and metabolome of salt sensitive and tolerant poplar species reveals evolutionary adaption of stress tolerance mechanisms. BMC Plant Biol 10","Janz D. et al. ",2010," Pathway analysis of the transcriptome and metabolome of salt sensitive and tolerant poplar species reveals evolutionary adaption of stress tolerance mechanisms. "]
["Populus","NaCl","Leaf","T","microarray",null,null,"comparative","Beritognolo I, A Harfouche, F Brilli, G Prosperini, M Gaudet, M Brosche, F Salani, E Kuzminsky, P Auvinen, L Paulin, J Kangasjarvi, F Loreto, R Valentini, GS Mugnozza, M Sabatti (2011) Comparative study of transcriptional and physiological responses to salinity stress in two contrasting Populus alba L. genotypes. Tree Physiol 31:1335-1355. doi: 10.1093/treephys/tpr083","Beritognolo I. et al. ",2011," Comparative study of transcriptional and physiological responses to salinity stress in two contrasting populus alba l. Genotypes. "]
["Populus","NaCl","Leaf","T","RNAseq",{"$nulls":3},"Chen S, J Jiang, HY Li, GF Liu (2012) The salt-responsive transcriptome of Populus simonii x Populus nigra via DGE. Gene 504:203-212. doi: 10.1016/j.gene.2012.05.023","Chen S. et al. ",2012," The salt-responsive transcriptome of populus simonii x populus nigra via dge. "]
["Populus","NaCl","Callus","T","RNAseq",null,null,"comparative","Zhang J, JJ Feng, J Lu, YZ Yang, X Zhang, DS Wan, JQ Liu (2014) Transcriptome differences between two sister desert poplar species under salt stress. BMC Genomics 15. doi: 10.1186/1471-2164-15-337","Zhang J. et al. ",2014," Transcriptome differences between two sister desert poplar species under salt stress. "]
["Populus","cold","Stem","T","microarray",{"$nulls":3},"Ko JH, C Prassinos, D Keathley, KH Han (2011) Novel aspects of transcriptional regulation in the winter survival and maintenance mechanism of poplar. Tree Physiol 31:208-225. doi: 10.1093/treephys/tpq109","Ko J. H. et al. ",2011," Novel aspects of transcriptional regulation in the winter survival and maintenance mechanism of poplar. "]
["Populus","cold","Leaf","T","microarray",{"$nulls":3},"Song YP, QQ Chen, D Ci, DQ Zhang (2013) Transcriptome profiling reveals differential transcript abundance in response to chilling stress in Populus simonii. Plant Cell Reports 32:1407-1425. doi: 10.1007/s00299-013-1454-x","Song Y. P. et al. ",2013," Transcriptome profiling reveals differential transcript abundance in response to chilling stress in populus simonii. "]
["Populus","cold","Leaf","T","RNAseq",{"$nulls":3},"Chen JH, QQ Tian, T Pang, LB Jiang, RL Wu, XL Xia, WL Yin (2014) Deep-sequencing transcriptome analysis of low temperature perception in a desert tree, Populus euphratica. BMC Genomics 15. doi: 10.1186/1471-2164-15-326","Chen J. H. et al. ",2014," Deep-sequencing transcriptome analysis of low temperature perception in a desert tree, populus euphratica. "]
["Populus","CO2","Leaf","T","microarray",{"$nulls":3},"Taylor G, NR Street, PJ Tricker, A Sjodin, L Graham, O Skogstrom, C Calfapietra, G Scarascia-Mugnozza, S Jansson (2005) The transcriptome of Populus in elevated CO2. New Phytol 167:143-154","Taylor G. et al. ",2005," The transcriptome of populus in elevated co2. "]
["Populus","CO2","Leaf","T","microarray",null,null,"comparative","Cseke LJ, CJ Tsai, A Rogers, MP Nelsen, HL White, DF Karnosky, GK Podila (2009) Transcriptomic comparison in the leaves of two aspen genotypes having similar carbon assimilation rates but different partitioning patterns under elevated CO2. New Phytol 182:891-911. doi: 10.1111/j.1469-8137.2009.02812.x","Cseke L. J. et al.",2009," Transcriptomic comparison in the leaves of two aspen genotypes having similar carbon assimilation rates but different partitioning patterns under elevated co2. "]
["Populus","CO2","Leaf","T","microarray",{"$nulls":3},"Tallis MJ, Y Lin, A Rogers, J Zhang, NR Street, F Miglietta, DF Karnosky, P De Angelis, C Calfapietra, G Taylor (2010) The transcriptome of Populus in elevated CO2 reveals increased anthocyanin biosynthesis during delayed autumnal senescence. New Phytol 186:415-428. doi: 10.1111/j.1469-8137.2010.03184.x","Tallis M. J. et al.",2010,"The transcriptome of populus in elevated co2 reveals increased anthocyanin biosynthesis during delayed autumnal senescence. "]
["Populus","ozone","Leaf","T","microarray",null,null,"comparative","Street NR, MJ Tallis, J Tucker, M Brosche, J Kangasjarvi, M Broadmeadow, G Taylor (2011) The physiological, transcriptional and genetic responses of an ozone- sensitive and an ozone tolerant poplar and selected extremes of their F-2 progeny. Environ Pollut 159:45-54. doi: 10.1016/j.envpol.2010.09.027","Street N. R. et al. ",2011," The physiological, transcriptional and genetic responses of an ozone- sensitive and an ozone tolerant poplar and selected extremes of their f-2 progeny. "]
["Populus","ozone","Leaf","T","Q-PCR",null,"M","comparative","Dumont J, S Keski-Saari, M Keinanen, D Cohen, N Ningre, S Kontunen-Soppela, P Baldet, Y Gibon, P Dizengremel, MN Vaultier, Y Jolivet, E Oksanen, D Le Thiec (2014) Ozone affects ascorbate and glutathione biosynthesis as well as amino acid contents in three Euramerican poplar genotypes. Tree Physiol 34:253-266. doi: 10.1093/treephys/tpu004","Dumont J. et al.",2013,"Ozone affects ascorbate and glutathione biosynthesis as well as amino acid contents in three Euramerican poplar genotypes"]
["Populus","ozone","Leaf",null,null,"P",null,"comparative","Pandey V, E Haikio, S Lehesranta, K Koistinen, S Karenlampi, E Oksanen (2013) Proteomic Analysis of Two Hybrid Aspen Clones Subjected to Long-term Chronic Ozone Exposure in Open Field. Curr Proteomics 10:67-74","Pandey V. et al. ",2013," Proteomic analysis of two hybrid aspen clones subjected to long-term chronic ozone exposure in open field. "]
["Populus","ozone, drought","Leaf",null,null,"P",null,null,"Bohler S, K Sergeant, Y Jolivet, L Hoffmann, JF Hausman, P Dizengremel, J Renaut (2013) A physiological and proteomic study of poplar leaves during ozone exposure combined with mild drought. Proteomics 13:1737-1754. doi: 10.1002/pmic.201200193","Bohler S. et al.",2013,"A physiological and proteomic study of poplar leaves during ozone exposure combined with mild drought."]
["Populus","heat","Leaf","T","microarray",null,null,"comparative","Weston DJ, AA Karve, LE Gunter, SS Jawdy, XH Yang, SM Allen, SD Wullschleger (2011) Comparative physiology and transcriptional networks underlying the heat shock response in Populus trichocarpa, Arabidopsis thaliana and Glycine max. Plant Cell Environ 34:1488-1506. doi: 10.1111/j.1365-3040.2011.02347.x","Weston D. J. et al. ",2011," Comparative physiology and transcriptional networks underlying the heat shock response in populus trichocarpa, arabidopsis thaliana and glycine max. "]
["Populus","heat","Leaf","T","microarray",{"$nulls":3},"Song Y, Q Chen, D Ci, X Shao, D Zhang (2014) Effects of high temperature on photosynthesis and related gene expression in poplar. BMC Plant Biol 14:111","Song Y. et al.",2014,"Effects of high temperature on photosynthesis and related gene expression in poplar. "]
["Populus","hypoxia","Leaf, Root","T","microarray",null,"M","comparative","Kreuzwieser J, J Hauberg, KA Howell, A Carroll, H Rennenberg, AH Millar, J Whelan (2009) Differential Response of Gray Poplar Leaves and Roots Underpins Stress Adaptation during Hypoxia. Plant Physiol 149:461-473","Kreuzwieser J. et al. ",2009," Differential response of gray poplar leaves and roots underpins stress adaptation during hypoxia. "]
["Populus","copper","Root","T","macroarray",{"$nulls":3},"Guerra F, S Duplessis, A Kohler, F Martin, J Tapia, P Lebed, F Zamudio, E Gonzalez (2009) Gene expression analysis of Populus deltoides roots subjected to copper stress. Environ Exp Bot 67:335-344. doi: 10.1016/j.envexpbot.2009.08.004","Guerra F. et al. ",2009," Gene expression analysis of populus deltoides roots subjected to copper stress. "]
["Populus","aluminium","Root","T","microarray",{"$nulls":3},"Grisel N, S Zoller, M Kunzli-Gontarczyk, T Lampart, M Munsterkotter, I Brunner, L Bovet, J-P Metraux, C Sperisen (2010) Transcriptome responses to aluminum stress in roots of aspen (Populus tremula). BMC Plant Biol 10:185","Grisel N. et al.",2010," Transcriptome responses to aluminum stress in roots of aspen (populus tremula)"]
["Populus","cadmium","Leaf, Cambium",null,null,"P",null,null,"Durand TC, K Sergeant, S Planchon, S Carpin, P Label, D Morabito, JF Hausman, J Renaut (2010) Acute metal stress in Populus tremula x P. alba (717-1B4 genotype): Leaf and cambial proteome changes induced by cadmium(2+). Proteomics 10:349-368. doi: 10.1002/pmic.200900484","Durand T. C. et al. ",2010,"Acute metal stress in populus tremula x p. Alba (717-1b4 genotype): Leaf and cambial proteome changes induced by cadmium(2+"]
["Populus","cadmium","Bark","T","microarray",{"$nulls":3},"He J, H Li, J Luo, C Ma, S Li, L Qu, Y Gai, X Jiang, D Janz, A Polle, M Tyree, ZB Luo (2013) A transcriptomic network underlies microstructural and physiological responses to cadmium in Populus x canescens. Plant Physiol 162:424-439. doi: 10.1104/pp.113.215681","He J. et al.",2013,"A transcriptomic network underlies microstructural and physiological responses to cadmium in Populus x canescens"]
["Populus","zinc","Leaf","T","microarray",{"$nulls":3},"Di Baccio D, G Galla, T Bracci, A Andreucci, G Barcaccia, R Tognetti, L Sebastiani (2011) Transcriptome analyses of Populus x euramericana clone I-214 leaves exposed to excess zinc. Tree Physiol 31:1293-1308. doi: 10.1093/treephys/tpr106","Di Baccio D. et al. ",2011," Transcriptome analyses of populus x euramericana clone i-214 leaves exposed to excess zinc. "]
["Populus","embolism","Stem","T","microarray",{"$nulls":3},"Secchi F, ME Gilbert, MA Zwieniecki (2011) Transcriptome Response to Embolism Formation in Stems of Populus trichocarpa Provides Insight into Signaling and the Biology of Refilling. Plant Physiol 157:1419-1429. doi: 10.1104/pp.111.185124","Secchi F. et al.",2011,"Transcriptome response to embolism formation in stems of populus trichocarpa provides insight into signaling and the biology of refilling. "]
["Populus","multiple","Leaf, Stem",null,null,"P",null,null,"Pechanova O, CY Hsu, JP Adams, T Pechan, L Vandervelde, J Drnevich, S Jawdy, A Adeli, JC Suttle, AM Lawrence, TJ Tschaplinski, A Seguin, C Yuceer (2010) Apoplast proteome reveals that extracellular matrix contributes to multistress response in poplar. BMC Genomics 11. doi: 10.1186/1471-2164-11-674","Pechanova O. et al. ",2010," Apoplast proteome reveals that extracellular matrix contributes to multistress response in poplar. "]
["Populus","N deprivation","Root","T","microarray",{"$nulls":3},"Wei HR, YS Yordanov, T Georgieva, X Li, V Busov (2013) Nitrogen deprivation promotes Populus root growth through global transcriptome reprogramming and activation of hierarchical genetic networks. New Phytol 200:483-497. doi: 10.1111/nph.12375","Wei H. R. et al. ",2013," Nitrogen deprivation promotes populus root growth through global transcriptome reprogramming and activation of hierarchical genetic networks. "]
["Populus","multiple","Leaf,Root,S,X,caLeafLeafus","T","in silico",null,null,"family analysis","Cohen D, MB Bogeat-Triboulot, S Vialet-Chabrand, R Merret, PE Courty, S Moretti, F Bizet, A Guilliot, I Hummel (2013) Developmental and Environmental Regulation of Aquaporin Gene Expression across Populus Species: Divergence or Redundancy? PLoS One 8. doi: 10.1371/journal.pone.0055506","Cohen D. et al. ",2013," Developmental and environmental regulation of aquaporin gene expression across populus species: Divergence or redundancy? "]
["Populus","multiple","multiple","T","in silico",null,null,"family analysis","Tocquard K, C Lafon-Placette, D Auguin, B Muries, G Bronner, D Lopez, B Fumanal, J Franchel, S Bourgerie, S Maury, P Label, J-L Julien, P Roeckel-Drevet, J-S Venisse (2014) In silico study of wall-associated kinase family reveals large-scale genomic expansion potentially connected with functional diversification in Populus. Tree Genet Genomes 10:1135-1147. doi: 10.1007/s11295-014-0748-7","Tocquard et al",2014,"In silico study of wall-associated kinase family reveals large-scalegenomic expansion potentially connected with functional diversification in Populus"]
["Pinus","drought","Root, Growing needle","T","cDNA-AFLP",{"$nulls":3},"Dubos C, G Le Provost, D Pot, F Salin, C Lalane, D Madur, JM Frigerio, C Plomion (2003) Identification and characterization of water-stress-responsive genes in hydroponically grown maritime pine (Pinus pinaster) seedlings. Tree Physiol 23:169-179","Dubos C. et al. ",2003," Identification and characterization of water-stress-responsive genes in hydroponically grown maritime pine "]
["Pinus","drought","Root","T","cDNA-AFLP",{"$nulls":3},"Dubos C, C Plomion (2003) Identification of water-deficit responsive genes in maritime pine (Pinus pinaster Ait.) roots. Plant Mol Biol 51:249-262","Dubos C. et al. ",2003," Identification of water-deficit responsive genes in maritime pine roots"]
["Pinus","drought","Root","T","microarray",{"$nulls":3},"Lorenz WW, R Alba, YS Yu, JM Bordeaux, M Simoes, JFD Dean (2011) Microarray analysis and scale-free gene networks identify candidate regulators in drought-stressed roots of loblolly pine (P. taeda L.). BMC Genomics 12. doi: 10.1186/1471-2164-12-264","Lorenz W. W. et al. ",2011," Microarray analysis and scale-free gene networks identify candidate regulators in drought-stressed roots of loblolly pine "]
["Eucalyptus","drought","Shoot apices","T","RNAseq",null,null,"comparative","Villar E, C Klopp, C Noirot, E Novaes, M Kirst, C Plomion, JM Gion (2011) RNA-Seq reveals genotype-specific molecular responses to water deficit in eucalyptus. BMC Genomics 12. doi: 10.1186/1471-2164-12-538","Villar E. et al. ",2011," Rna-seq reveals genotype-specific molecular responses to water deficit in eucalyptus. "]
["Eucalyptus","drought","Leaf, Stem",null,null,"P",null,"comparative","Bedon F, E Villar, D Vincent, JW Dupuy, AM Lomenech, A Mabialangoma, P Chaumeil, A Barre, C Plomion, JM Gion (2012) Proteomic plasticity of two Eucalyptus genotypes under contrasted water regimes in the field. Plant Cell Environ 35:790-805. doi: 10.1111/j.1365-3040.2011.02452.x","Bedon F. et al. ",2012," Proteomic plasticity of two eucalyptus genotypes under contrasted water regimes in the field. "]
["Eucalyptus","drought","Stem ,Leaf, Root","T","Northern","P","M","comparative","Valdes AE, S Irar, JP Majadad, A Rodriguez, B Fernandez, M Pages (2013) Drought tolerance acquisition in Eucalyptus globulus (Labill.): A research on plant morphology, physiology and proteomics. J Proteomics 79:263-276. doi: 10.1016/j.jprot.2012.12.019","Valdes A. E. et al. ",2013," Drought tolerance acquisition in eucalyptus globulus "]
["Eucalyptus","cold","Leaf","T","macroarray",{"$nulls":3},"Keller G, PB Cao, H San Clemente, W El Kayal, C Marque, C Teulieres (2013) Transcript profiling combined with functional annotation of 2,662 ESTs provides a molecular picture of Eucalyptus gunnii cold acclimation. Trees - Struct Funct 27:1713-1735. doi: 10.1007/s00468-013-0918-5","Keller G. et al. ",2013," Transcript profiling combined with functional annotation of 2,662 ests provides a molecular picture of eucalyptus gunnii cold acclimation. "]
["Quercus","drought","Leaf",null,null,"P",null,null,"Sergeant K, N Spiess, J Renaut, E Wilhelm, JF Hausman (2011) One dry summer: A leaf proteome study on the response of oak to drought exposure. J Proteomics 74:1385-1395. doi: 10.1016/j.jprot.2011.03.011","Sergeant K. et al. ",2011," One dry summer: A leaf proteome study on the response of oak to drought exposure. "]
["Quercus","drought","Leaf","T","microarray",{"$nulls":3},"Spiess N, M Oufir, I Matusikova, M Stierschneider, D Kopecky, A Homolka, K Burg, S Fluch, JF Hausman, E Wilhelm (2012) Ecophysiological and transcriptomic responses of oak (Quercus robur) to long-term drought exposure and rewatering. Environ Exp Bot 77:117-126. doi: 10.1016/j.envexpbot.2011.11.010","Spiess N. et al. ",2012," Ecophysiological and transcriptomic responses of oak (quercus robur) to long-term drought exposure and rewatering. "]
["Fagus","ozone","L","T","SSH, ESTs",{"$nulls":3},"Olbrich M, G Betz, E Gerstner, C Langebartels, H Sandermann, D Ernst (2005) Transcriptome analysis of ozone-responsive genes in leaves of European beech (Fagus sylvatica L.). Plant Biology 7:670-676. doi: 10.1055/s-2005-873001","Olbrich M et al.",2005,"Transcriptome analysis of ozone-responsive genes in leaves of European beech (Fagus sylvatica L.)."]
["Fagus","ozone","Leaf",null,null,"P",null,null,"Kerner R, JB Winkler, JW Dupuy, M Jurgensen, C Lindermayr, D Ernst, G Muller-Starck (2011) Changes in the proteome of juvenile European beech following three years exposure to free-air elevated ozone. iForest 4:69-76. doi: 10.3832/ifor0570-004","Kerner R. et al. ",2011," Changes in the proteome of juvenile european beech following three years exposure to free-air elevated ozone. "]
["Pseudostuga","drought","Seedling, Root","T","RNAseq",{"$nulls":3},"Muller T, I Ensminger, KJ Schmid (2012) A catalogue of putative unique transcripts from Douglas-fir (Pseudotsuga menziesii) based on 454 transcriptome sequencing of genetically diverse, drought stressed seedlings. BMC Genomics 13. doi: 10.1186/1471-2164-13-673","Muller T. et al. ",2012,"A catalogue of putative unique transcripts from douglas-fir (pseudotsuga menziesii) based on 454 transcriptome sequencing of genetically diverse, drought stressed seedlings. "]
[]
["Reviews on abiotic stress "]
["tree","drought",{"$nulls":5},"review","Polle A, A Altman, XN Jiang (2006) Towards genetic engineering for drought tolerance in trees.  Tree Transgenesis: Recent Developments. Springer-Verlag Berlin, Berlin, pp. 275-297","Polle A. et al. ",2006," Towards genetic engineering for drought tolerance in trees"]
["populus","multiple",{"$nulls":5},"review","Wullschleger SD, DJ Weston, JM Davis (2009) Populus Responses to Edaphic and Climatic Cues: Emerging Evidence from Systems Biology Research. Crit Rev Plant Sci 28:368-374","Wullschleger S. D. et al. ",2009," Populus responses to edaphic and climatic cues: Emerging evidence from systems biology research. "]
["populus","biotic/abiotic",{"$nulls":5},"review","Chen F, CJ Liu, TJ Tschaplinski, N Zhao (2009) Genomics of Secondary Metabolism in Populus: Interactions with Biotic and Abiotic Environments. Crit Rev Plant Sci 28:375-392. doi: 10.1080/07352680903241279","Chen F. et al. ",2009," Genomics of secondary metabolism in populus: Interactions with biotic and abiotic environments. "]
["populus","abiotic",{"$nulls":5},"review","Popko J, R Hansch, RR Mendel, A Polle, T Teichmann (2010) The role of abscisic acid and auxin in the response of poplar to abiotic stress. Plant Biology 12:242-258","Popko J. et al. ",2010," The role of abscisic acid and auxin in the response of poplar to abiotic stress. "]
["trees","drought",{"$nulls":5},"review","Hamanishi ET, MM Campbell (2011) Genome-wide responses to drought in forest trees. Forestry 84:273-283. doi: 10.1093/forestry/cpr012","Hamanishi E. T. et al.",2011," Genome-wide responses to drought in forest trees. "]
["trees","multiple",{"$nulls":5},"review","Harfouche A, R Meilan, A Altman (2014) Molecular and physiological responses to abiotic stress in forest trees and their relevance to tree improvement. Tree Physiol  10.1093/treephys/tpu012. doi: 10.1093/treephys/tpu012","Harfouche A. ",2014,"Molecular and physiological responses to abiotic stress in forest trees and their relevance to tree improvement"]
["woody species","multiple",{"$nulls":5},"review","Pinheiro C, L Guerra-Guimaraes, TS David, A Vieira (2014) Proteomics: State of the art to study Mediterranean woody species under stress. Environ Exp Bot 103:117-127. doi: 10.1016/j.envexpbot.2014.01.010","Pinheiro C. et al. ",2014," Proteomics: State of the art to study mediterranean woody species under stress. "]
[]
["Other reviews/opinion"]
["Populus",{"$nulls":6},"review","Yang XH, UC Kalluri, SP DiFazio, SD Wullschleger, TJ Tschaplinski, ZM Cheng, GA Tuskan (2009) Poplar Genomics: State of the Science. Crit Rev Plant Sci 28:285-308","Yang X. H. et al. ",2009," Poplar genomics: State of the science. "]
["trees",{"$nulls":6},"review","Abril N, JM Gion, R Kerner, G Muller-Starck, RMN Cerrillo, C Plomion, J Renaut, L Valledor, JV Jorrin-Novo (2011) Proteomics research on forest trees, the most recalcitrant and orphan plant species. Phytochemistry 72:1219-1242. doi: 10.1016/j.phytochem.2011.01.005","Abril N. et al.",2011,"Proteomics research on forest trees, the most recalcitrant and orphan plant species"]
["trees",{"$nulls":6},"review","Neale DB, A Kremer (2011) Forest tree genomics: growing resources and applications. Nat Rev Genet 12:111-122. doi: 10.1038/nrg2931","Neale and Kemer",2011,"Forest tree genomics: growing ressources and applications"]
["trees",{"$nulls":6},"review","Castell WZ, D Ernst (2012) Experimental 'omics' data in tree research: facing complexity. Trees - Struct Funct 26:1723-1735. doi: 10.1007/s00468-012-0777-5","Castell W. Z. et al. ",2012," Experimental 'omics' data in tree research: Facing complexity"]
["trees",{"$nulls":6},"review","Staszak AM, TA Pawlowski (2012) Forest tree research in post genomic era. Introduction to systems biology of broadleaves. Dendrobiology 68:113-123","Staszak A. M. et al. ",2012," Forest tree research in post genomic era. Introduction to systems biology of broadleaves. "]
["Populus",{"$nulls":6},"review","Wullschleger SD, DJ Weston, SP DiFazio, GA Tuskan (2013) Revisiting the sequencing of the first tree genome: Populus trichocarpa. Tree Physiol 33:357-364. doi: 10.1093/treephys/tps081","Wullschleger S. D. et al. ",2013," Revisiting the sequencing of the first tree genome: Populus trichocarpa. "]
["trees",{"$nulls":6},"opinion","Neale DB, CH Langley, SL Salzberg, JL Wegrzyn (2013) Open access to tree genomes: the path to a better forest. Genome Biol 14. doi: 10.1186/gb-2013-14-6-120","Neale et al.",2013,"Open access to tree genomes: the path to a better forest"]

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