Finding confidence limits on population growth rates: Bootstrap and analytic methods - Archive ouverte HAL Accéder directement au contenu
Article Dans Une Revue Mathematical Biosciences Année : 2009

Finding confidence limits on population growth rates: Bootstrap and analytic methods

Résumé

When predicting population dynamics, the value of the prediction is not enough and should be accompanied by a confidence interval that integrates the whole chain of errors, from observations to predictions via the estimates of the parameters of the model. Matrix models are often used to predict the dynamics of age- or size-structured populations. Their parameters are vital rates. This study aims (1) at assessing the impact of the variability of observations on vital rates, and then on model’s predictions, and (2) at comparing three methods for computing confidence intervals for values predicted from the models. The first method is the bootstrap. The second method is analytic and approximates the standard error of predictions by their asymptotic variance as the sample size tends to infinity. The third method combines use of the bootstrap to estimate the standard errors of vital rates with the analytical method to then estimate the errors of predictions from the model. Computations are done for an Usher matrix models that predicts the asymptotic (as time goes to infinity) stock recovery rate for three timber species in French Guiana. Little difference is found between the hybrid and the analytic method. Their estimates of bias and standard error converge towards the bootstrap estimates when the error on vital rates becomes small enough, which corresponds in the present case to a number of observations greater than 5000 trees.
Fichier principal
Vignette du fichier
Picard2009.pdf (185.44 Ko) Télécharger le fichier
Origine : Fichiers produits par l'(les) auteur(s)

Dates et versions

hal-01197524 , version 1 (03-08-2021)

Licence

Paternité

Identifiants

Citer

Nicolas Picard, Pierrette Chagneau, Frédéric Mortier, Avner Bar-Hen. Finding confidence limits on population growth rates: Bootstrap and analytic methods. Mathematical Biosciences, 2009, 219 (1), pp.23-31. ⟨10.1016/j.mbs.2009.02.002⟩. ⟨hal-01197524⟩
128 Consultations
64 Téléchargements

Altmetric

Partager

Gmail Facebook X LinkedIn More