Genomic clustering and homology between HET-S and the NWD2 STAND protein in various fungal genomes - Archive ouverte HAL
Article Dans Une Revue PLoS ONE Année : 2012

Genomic clustering and homology between HET-S and the NWD2 STAND protein in various fungal genomes

Résumé

associated with non-self recognition. The prion forming domain (PFD) of HET-s adopts a beta-solenoid amyloid structure characterized by the two fold repetition of an elementary triangular motif. [Het-s] induces cell death when interacting with HET-S, an allelic variant of HET-s. When templated by [Het-s], HET-S undergoes a trans-conformation, relocates to the cell membrane and induces toxicity.Methodology/Principal Findings: Here, comparing HET-s homologs from different species, we devise a consensus for the HET-s elementary triangular motif. We use this motif to screen genomic databases and find a match to the N-terminus of NWD2, a STAND protein, encoded by the gene immediately adjacent to het-S. STAND proteins are signal transducing ATPases which undergo ligand-induced oligomerisation. Homology modelling predicts that the NWD2 N-terminal region adopts a HET-s-like fold. We propose that upon NWD2 oligomerisation, these N-terminal extensions adopt the beta-solenoid fold and template HET-S to adopt the amyloid fold and trigger toxicity. We extend this model to a putative prion, the sigma infectious element in Nectria haematococca, because the s locus controlling propagation of sigma also encodes a STAND protein and displays analogous features. Comparative genomic analyses indicate evolutionary conservation of these STAND/prion-like gene pairs, identify a number of novel prion candidates and define, in addition to the HET-s PFD motif, two distinct, novel putative PFD-like motifs.Conclusions/Significance: We suggest the existence, in the fungal kingdom, of a widespread and evolutionarily conserved mode of signal transduction based on the transmission of an amyloid-fold from a NOD-like STAND receptor protein to an effector protein.

Dates et versions

hal-00702987 , version 1 (31-05-2012)

Identifiants

Citer

Asen Daskalov, Mathieu Paoletti, Frederique Ness, Sven J Saupe. Genomic clustering and homology between HET-S and the NWD2 STAND protein in various fungal genomes. PLoS ONE, 2012, 7 (4), pp.e34854. ⟨10.1371/journal.pone.0034854⟩. ⟨hal-00702987⟩

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