The biogeochemistry of carbon and nutrients (N,P) in the surface layer of the ocean strongly depends on the complex interactions between primary producers (phytoplankton) and remineralizers (heterotrophic bacteria). To understand how these interactions impact the overall DOC dynamics in the surface layer of the Mediterranean Sea, we implemented, using Eco3M (Ecological Mechanistic Modular Modelling tool), a multi-element model with a mechanistic description of primary production. We studied the model steady state results under various nutrient conditions and fixed cell abundances. By doing so, we show how the bottom up control of osmotrophs growth can impact the overall DOC dynamics in the system. Based on our set of parameters, the biogeochemical characteristics displayed by the model appear realistic when compared to literature data for the Mediterranean basin. Differences in DOC dynamics between N and P limited systems in the model, lead to the conclusion that the unusually high N:P ratio of the Mediterranean Sea may favour the uncoupling between growth and carbon production leading to higher DOC accumulation compared to systems with lower N:P ratio.