Article Dans Une Revue Bioinformatics Année : 2002

ENDscript: a workflow to display sequence and structure information.

Résumé

ENDscript is a web server grouping popular programs such as BLAST, Multalin and DSSP. It uses as query the co-ordinates file of a protein in Protein Data Bank format and generates PostScript and png figures showing: residues conserved after a multiple alignment against homologous sequences, secondary structure elements, accessibility, hydropathy and intermolecular contacts. Thus, the user can relate quickly 1D, 2D and 3D information of a protein of known structure. AVAILABILITY: http://genopole.toulouse.inra.fr/ENDscriptENDscript is a web server grouping popular programs such as BLAST, Multalin and DSSP. It uses as query the co-ordinates file of a protein in Protein Data Bank format and generates PostScript and png figures showing: residues conserved after a multiple alignment against homologous sequences, secondary structure elements, accessibility, hydropathy and intermolecular contacts. Thus, the user can relate quickly 1D, 2D and 3D information of a protein of known structure. AVAILABILITY: http://genopole.toulouse.inra.fr/ENDscript

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Dates et versions

hal-00313126 , version 1 (27-08-2008)

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  • HAL Id : hal-00313126 , version 1

Citer

P. Gouet, E. Courcelle. ENDscript: a workflow to display sequence and structure information.. Bioinformatics, 2002, 18, pp.767-768. ⟨hal-00313126⟩
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