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HaploPOP: a software that improves population assignment by combining markers into haplotypes

Nicolas Duforet-Frebourg , Lucie Gattepaille , Michael G.B Blum , Mattias Jakobsson
BMC Bioinformatics, 2015, 16 (1), ⟨10.1186/s12859-015-0661-6⟩
Journal articles hal-02271120v1

Long-Term Prognostic Value of Gasping During Out-of-Hospital Cardiac Arrest

Guillaume Debaty , Jose Labarere , Ralph Frascone , Marvin Wayne , Robert Swor et al.
Journal of the American College of Cardiology, 2017, 70 (12), pp.1467-1476. ⟨10.1016/j.jacc.2017.07.782⟩
Journal articles hal-02070687v1

Set-Based Analysis for Biological Modeling

Thao Dang , Tommaso Dreossi , Eric Fanchon , Oded Maler , Carla Piazza et al.
Automated Reasoning for Systems Biology and Medicine, 2019, 978-3-030-17296-1
Book sections hal-02273714v1

Certified Roundoff Error Bounds Using Bernstein Expansions and Sparse Krivine-Stengle Representations

Victor Magron , Alexandre Rocca , Thao Dang
68 (7), pp.953-966, 2019, ⟨10.1109/TC.2018.2851235⟩
Books hal-02402354v1

Detecting adaptive evolution based on association with ecological gradients: Orientation matters!

E Frichot , S Schoville , P de Villemereuil , E Gaggiotti , O. François et al.
Heredity, 2015, 115 (1), pp.22-28
Journal articles hal-02004814v1

Genomics of cellular proliferation in periodic environmental fluctuations

Jérôme Salignon , Magali Richard , Etienne Fulcrand , Hélène Duplus‐bottin , Gaël Yvert et al.
Molecular Systems Biology, 2018, 14 (3), pp.e7823
Journal articles hal-02009632v1

Involvement in Root Cause Analysis and Patient Safety Culture Among Hospital Care Providers

Bastien Boussat , Arnaud Seigneurin , Joris Giai , Kevin Kamalanavin , José Labarère et al.
Journal of Patient Safety, 2021, 17 (8), pp.e1194-e1201. ⟨10.1097/PTS.0000000000000456⟩
Journal articles hal-03836865v2

Hospital survey on patient safety culture (HSOPS)

Joris Giai , Bastien Boussat , Pauline Occelli , Gérald Gandon , Arnaud Seigneurin et al.
International Journal for Quality in Health Care, 2017, 29 (5), pp.685-692. ⟨10.1093/intqhc/mzx086⟩
Journal articles hal-01719514v1

Mutations in CFAP43 and CFAP44 cause male infertility and flagellum defects in $Trypanosoma$ and human.

Charles Coutton , Alexandra S. Vargas , Amir Amiri-Yekta , Zine-Eddine Kherraf , Selima Fourati Ben Mustapha et al.
Nature Communications, 2018, 9, pp.686. ⟨10.1038/s41467-017-02792-7⟩
Journal articles hal-01724640v1

Hepatitis C virus whole genome sequencing: Current methods/issues and future challenges

Pauline Trémeaux , Alban Caporossi , Marie-Ange Thélu , Michael Blum , Vincent Leroy et al.
Critical Reviews in Clinical Laboratory Sciences, 2016, 53 (5), pp.341-351. ⟨10.3109/10408363.2016.1163663⟩
Journal articles hal-02060020v1

The TRACTOR Project: TRACking and MoniToring Occupational Risks in Agriculture Using French Insurance Health Data (MSA)

Pascal Petit , Delphine Bosson-Rieutort , Charlotte Maugard , Elise Gondard , Damien Ozenfant et al.
Annals of Work Exposures and Health, 2021, ⟨10.1093/annweh/wxab083⟩
Journal articles hal-03364393v1

Prognostic factors for extracorporeal cardiopulmonary resuscitation recipients following out-of-hospital refractory cardiac arrest. A systematic review and meta-analysis

Guillaume Debaty , Valentin Babaz , Michel Durand , Lucie Gaide-Chevronnay , Emmanuel Fournel et al.
Resuscitation, 2017, 112, pp.1-10. ⟨10.1016/j.resuscitation.2016.12.011⟩
Journal articles hal-02070734v1

Damage Control Surgery for Non-traumatic Abdominal Emergencies

Edouard Girard , Julio Abba , Bastien Boussat , Bertrand Trilling , Adrian Mancini et al.
World Journal of Surgery, 2018, 42 (4), pp.965-973. ⟨10.1007/s00268-017-4262-6⟩
Journal articles hal-02064517v1

Multiple introductions and population structure during the rapid expansion of the invasive Sahara mustard ( Brassica tournefortii )

Daniel Winkler , Kenneth Chapin , Olivier François , J. David Garmon , Brandon Gaut et al.
Ecology and Evolution, 2019, 9 (14), pp.7928-7941. ⟨10.1002/ece3.5239⟩
Journal articles hal-03289673v1

Certified Roundoff Error Bounds using Bernstein Expansions and Sparse Krivine-Stengle Representations

Victor Magron , Alexandre Rocca , Thao Dang
IEEE Transactions on Computers, In press, ⟨10.1109/TC.2018.2851235⟩
Journal articles hal-01956817v1


Christophe Chiquet , Sylvie Berthemy-Pellet , Joséphine Altayrac-Bethenod , Florent Aptel , Jose Labarere et al.
RETINA. The Journal of Retinal and Vitreous Diseases, 2015, 35 (6), pp.1256-1265. ⟨10.1097/IAE.0000000000000437⟩
Journal articles hal-02271153v1

Cerebral imaging in infectious endocarditis: A clinical study

Julia Champey , Patricia Pavèse , Helene Bouvaist , Jean-Philippe Vittoz , Florence Tahon et al.
ACS Infectious Diseases, 2015, 48 (3), pp.235-240. ⟨10.3109/23744235.2015.1109704⟩
Journal articles hal-02271258v1

Hackathon-driven tutorial development

Bruno Grande , Arjun Baghela , Anna Cavalla , Florian Privé , Peter Zhang et al.
F1000Research, 2018, 7, pp.1974. ⟨10.12688/f1000research.16959.1⟩
Journal articles hal-02272044v1

Chapter 11. Strategies for Building Protein–Glycosaminoglycan Interaction Networks Combining SPRi, SPR, and BLI

Sylvain Vallet , Lisette Deddens , Arnaud Vonarburg , Romain Salza , Clément Faye et al.
Handbook of Surface Plasmon Resonance: Edition 2, 2, Royal Society of Chemistry, pp.398-414, 2017, 978-1-78262-730-2
Book sections hal-02272496v1

Are comorbidities associated with long-term survival of lung cancer? A population-based cohort study from French cancer registries

A. Seigneurin , P. Delafosse , B. Tretarre , A.S. Woronoff , M. Velten et al.
BMC Cancer, 2018, 18 (1), ⟨10.1186/s12885-018-5000-7⟩
Journal articles hal-02272374v1

Is brain angio-MRI useful in infective endocarditis management?

J. Champey , P. Pavese , H. Bouvaist , M. Maillet , A. Kastler et al.
European Journal of Clinical Microbiology and Infectious Diseases, 2016, 35 (12), pp.2053-2058. ⟨10.1007/s10096-016-2764-z⟩
Journal articles hal-02271876v1

Modeling the functional coupling between 3D chromatin organization and epigenome

Cédric Vaillant , Daniel Jost
Modeling the 3D conformation of genomes, 2019
Book sections hal-02386050v1

The Rise and Fall of African Rice Cultivation Revealed by Analysis of 246 New Genomes

Philippe Cubry , Christine Tranchant-Dubreuil , Anne-Céline Thuillet , Cécile Monat , Marie-Noelle Ndjiondjop et al.
Current Biology - CB, 2018, 28 (14), pp.2274-2282.e6. ⟨10.1016/j.cub.2018.05.066⟩
Journal articles hal-01996543v1

Selective termination of lncRNA transcription promotes heterochromatin silencing and cell differentiation

Leila Touat‐todeschini , Yuichi Shichino , Mathieu Dangin , Nicolas Thierry-Mieg , Benoit Gilquin et al.
EMBO Journal, 2017, 36 (17), pp.2626 - 2641. ⟨10.15252/embj.201796571⟩
Journal articles hal-01877979v1

Exploiting Single-Cell Quantitative Data to Map Genetic Variants Having Probabilistic Effects

Florent Chuffart , Magali Richard , Daniel Jost , Claire Burny , Hélène Duplus-Bottin et al.
PLoS Genetics, 2016, 12 (8), pp.e1006213
Journal articles hal-01976590v1

How epigenome drives chromatin folding and dynamics, insights from efficient coarse-grained models of chromosomes

Surya Ghosh , Daniel Jost
PLoS Computational Biology, 2018, 14 (5), pp.e1006159
Journal articles hal-01976607v1

Targeted temperature management in the ICU: Guidelines from a French expert panel

Alain Cariou , Jean-François Payen , Karim Asehnoune , Gérard Audibert , Astrid Botte et al.
Anaesthesia Critical Care & Pain Medicine, 2018, 37 (5), pp.481-491. ⟨10.1016/j.accpm.2017.06.003⟩
Journal articles hal-02070707v1

Whole-exome sequencing identifies mutations in FSIP2 as a recurrent cause of multiple morphological abnormalities of the sperm flagella

Guillaume Martinez , Zine-Eddine Kherraf , Raoudha Zouari , Selima Fourati Ben Mustapha , Antoine Saut et al.
Human Reproduction, 2018, 33 (10), pp.1973 - 1984. ⟨10.1093/humrep/dey264⟩
Journal articles hal-01877993v1

0431 How can we avoid re-identification risk in big-data analysis? proposition of a new strategy of geographical subdivisions using gis tools

Charlotte Maugard , Christophe Cancé , Pauline Achard , Olivier François , Vincent Bonneterre et al.
Eliminating Occupational Disease: Translating Research into Action, EPICOH 2017, EPICOH 2017, 28–31 August 2017, Edinburgh, UK, 2017, Edinburgh, United Kingdom. pp.A136.2-A137
Conference papers hal-01996501v1

Controlling false discoveries in genome scans for selection

Olivier François , Helena Martins , Kevin Caye , Sean D Schoville
Molecular Ecology, 2016, 25 (2), pp.454-469. ⟨10.1111/mec.13513⟩
Journal articles hal-01462221v1