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Document type : Journal articles
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Transcriptomic analysis reveals specific metabolic pathways of enterohemorrhagic Escherichia coli O157:H7 in bovine digestive contents

Audrey Segura , Marine Bertoni , Pauline Auffret , Christophe C. Klopp , Olivier Bouchez et al.
BMC Genomics, 2018, 19 (1), ⟨10.1186/s12864-018-5167-y⟩
Journal articles hal-02628554v1
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Cell-wall hydrolases as antimicrobials against staphylococcus species: Focus on Sle1

Aurore Vermassen , Régine Talon , Carine Andant , Christian Provot , Mickael M. Desvaux et al.
Microorganisms, 2019, 7 (11), pp.559-574. ⟨10.3390/microorganisms7110559⟩
Journal articles hal-02624652v1
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GPR40 mediates potential positive effects of a saturated fatty acid enriched diet on bone

Claire Philippe , Fabien Wauquier , Jean-Francois Landrier , Lauriane Bonnet , Elisabeth Miot-Noirault et al.
Molecular Nutrition and Food Research, 2017, 61 (2), pp.1600219. ⟨10.1002/mnfr.201600219⟩
Journal articles hal-01506660v1
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InlL from Listeria monocytogenes Is Involved in Biofilm Formation and Adhesion to Mucin

Magdalena Popowska , Agata Krawczyk-Balska , Rafał Ostrowski , Mickael M. Desvaux
Frontiers in Microbiology, 2017, 8, ⟨10.3389/fmicb.2017.00660⟩
Journal articles hal-02910751v1
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Transcriptomic Analysis of Staphylococcus xylosus in Solid Dairy Matrix Reveals an Aerobic Lifestyle Adapted to Rind

Sabine Leroy , Sergine Even , Pierre Micheau , Anne de La Foye , Valérie Laroute et al.
Microorganisms, 2020, 8 (11), pp.1807. ⟨10.3390/microorganisms8111807⟩
Journal articles hal-03010352v1
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Microplastics: What happens in the human digestive tract? First evidences in adults using in vitro gut models

Elora Fournier , Mathilde Leveque , Philippe Ruiz , jérémy ratel , Claude Durif et al.
Journal of Hazardous Materials, 2022, 442, pp.130010. ⟨10.1016/j.jhazmat.2022.130010⟩
Journal articles hal-03799643v1
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Evidence for nitric oxide synthase activity in staphylococcus xylosus mediating nitrosoheme formation

Geoffrey Ras , Véronique Zuliani , Patrick Derkx , Tim M Seibert , Sabine Leroy et al.
Frontiers in Microbiology, 2017, 8, pp.598. ⟨10.3389/fmicb.2017.00598⟩
Journal articles hal-01605109v1
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Effects of scFOS on the composition of fecal microbiota and anxiety in patients with irritable bowel syndrome: a randomized, double blind, placebo controlled study

F. Azpiroz , C. Dubray , A. Bernalier-Donadille , M. Cardot , A. Accarino et al.
Neurogastroenterology & Motility, 2017, 29 (2), pp.1-8. ⟨10.1111/nmo.12911⟩
Journal articles hal-01658456v1
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Revealing large metagenomic regions through long DNA fragment hybridization capture

Cyrielle Gasc , Pierre Peyret
Microbiome, 2017, 5, ⟨10.1186/s40168-017-0251-0⟩
Journal articles hal-01595724v1
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A proof of concept infant-microbiota associated rat model for studying the role of gut microbiota and alleviation potential of Cutibacterium avidum in infant colic

Vanesa Natalin Rocha Martin , Christophe Del’homme , Clarissa Schwab , Christian Braegger , Christophe Lacroix et al.
Frontiers in nutrition, 2022, 9, ⟨10.3389/fnut.2022.902159⟩
Journal articles hal-03779367v1
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Pathogenicity Factors of Genomic Islands in Intestinal and Extraintestinal Escherichia coli

Mickael M. Desvaux , Guillaume Dalmasso , Racha Beyrouthy , Nicolas Barnich , Julien Delmas et al.
Frontiers in Microbiology, 2020, 11, ⟨10.3389/fmicb.2020.02065⟩
Journal articles hal-02948743v1
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Genetic, physiological, and cellular heterogeneities of bacterial pathogens in food matrices: Consequences for food safety

Cédric Saint Martin , Grégory Jubelin , Maud Darsonval , Sabine Leroy , Charlène Leneveu-Jenvrin et al.
Comprehensive Reviews in Food Science and Food Safety, 2022, 25 (1), pp.4294-4326. ⟨10.1111/1541-4337.13020⟩
Journal articles hal-03762779v1
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Exploring the Diversity of Fungal DyPs in Mangrove Soils to Produce and Characterize Novel Biocatalysts

Amal Ben Ayed , Geoffroy Saint-Genis , Laurent Vallon , Dolores Linde , Annick Turbé-Doan et al.
Journal of Fungi, 2021, 7 (5), pp.321. ⟨10.3390/jof7050321⟩
Journal articles hal-03215284v1
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Genomic and Metabolic Characteristics of the Pathogenicity in Pseudomonas aeruginosa

Telma de Sousa , Michel Hébraud , Maria L N Enes Dapkevici , Luís Maltez , José Eduardo Pereira et al.
International Journal of Molecular Sciences, 2021, 22 (23), pp.12892. ⟨10.3390/ijms222312892⟩
Journal articles hal-03455145v1
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Efficacy and safety profile of LCR35 complete freeze-dried culture in irritable bowel syndrome: A randomized, double-blind study

Michel Dapoigny , Thierry Piche , Philippe Ducrotté , Bernard Lunaud , Jean-Michel Cardot et al.
World Journal of Gastroenterology, 2012, 18 (17), pp.2067-2075. ⟨10.3748/wjg.v18.i17.2067⟩
Journal articles hal-02644194v1
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Chimeric Peptides Derived from Bovine Lactoferricin and Buforin II: Antifungal Activity against Reference Strains and Clinical Isolates of Candida spp.

Katherine Aguirre-Guataqui , Mateo Márquez-Torres , Héctor Manuel Pineda-Castañeda , Yerly Vargas-Casanova , Andrés Ceballos-Garzon et al.
Antibiotics, 2022, 11 (11), pp.1561. ⟨10.3390/antibiotics11111561⟩
Journal articles hal-03858991v1
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In vitro adhesion properties of shiga toxin-producing Escherichia coli isolated from cattle, food, and humans

Nathalie Pradel , Lucie Etienne Mesmin , Jonathan Thevenot , Charlotte Cordonnier , Stephanie Blanquet Diot et al.
Frontiers in Microbiology, 2015, 6, ⟨10.3389/fmicb.2015.00156⟩
Journal articles hal-02636431v1
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Exposure to polyethylene microplastics alters immature gut microbiome in an infant in vitro gut model

Elora Fournier , jérémy ratel , Sylvain Denis , Mathilde Leveque , Philippe Ruiz et al.
Journal of Hazardous Materials, 2023, 443 (B), pp.130383. ⟨10.1016/j.jhazmat.2022.130383⟩
Journal articles hal-03791155v1
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Mixed mucosal-parenteral immunizations with the broadly conserved pathogenic Escherichia coli antigen SslE induce a robust mucosal and systemic immunity without affecting the murine intestinal microbiota

Ilham Naili , Juliette Vinot , Barbara Baudner , Annick Bernalier-Donadille , Mariagrazia Pizza et al.
Vaccine, 2019, 37 (2), pp.314-324. ⟨10.1016/j.vaccine.2018.10.008⟩
Journal articles hal-02909578v1
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Surfaceome and Proteosurfaceome in Parietal Monoderm Bacteria: Focus on Protein Cell-Surface Display

Mickael M. Desvaux , Thomas Candela , Pascale Serror
Frontiers in Microbiology, 2018, 9, ⟨10.3389/fmicb.2018.00100⟩
Journal articles hal-01727158v1
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Characterisation of gut, lung, and upper airways microbiota in patients with non-small cell lung carcinoma Study protocol for case-control observational trial Study Protocol Clinical Trial

Rea Bingula , Marc Filaire , Nina Radosevic-Robin , Jean-Yves Berthon , Annick Bernalier-Donadille et al.
Medicine, 2018, 97 (50), pp.e13676. ⟨10.1097/MD.0000000000013676⟩
Journal articles hal-02388057v1
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Fibrochip, a functional DNA microarray to monitor cellulolytic and hemicellulolytic activities of rumen microbiota

Sophie Marre , Frédérique Durand , Ourdia Bouzid , Pascale Mosoni , Ali R. Bayat et al.
Frontiers in Microbiology, 2018, 9, ⟨10.3389/fmicb.2018.00215⟩
Journal articles hal-02623146v1
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Identification of the Autochaperone Domain in the Type Va Secretion System (T5aSS): Prevalent Feature of Autotransporters with a β-Helical Passenger

Maricarmen Rojas-Lopez , Mohamed Zorgani , Lawrence Kelley , Xavier Bailly , Andrey Kajava et al.
Frontiers in Microbiology, 2018, 8, ⟨10.3389/fmicb.2017.02607⟩
Journal articles hal-01968806v1
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Factors involved in the persistence of a shiga toxin-producing escherichia coil O157:H7 strain in bovine feces and gastro-intestinal content

Audrey Segura , Pauline Auffret , Delphine Bibbal , Marine Bertoni , Alexandra Durand et al.
Frontiers in Microbiology, 2018, 9, pp.375. ⟨10.3389/fmicb.2018.00375⟩
Journal articles hal-02626996v1
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Whole Rye Consumption Improves Blood and Liver n-3 Fatty Acid Profile and Gut Microbiota Composition in Rats

Fayçal Ounnas , Florence Privé , Patricia Salen , Nadia Gaci , William Tottey et al.
PLoS ONE, 2016, 11 (2), pp.e0148118. ⟨10.1371/journal.pone.0148118⟩
Journal articles hal-02184959v1
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Extending in vitro digestion models to specific human populations: Perspectives, practical tools and bio-relevant information

Carmit Shani Levi , Paula Alvito , Ana Andrés , Ricardo Assunção , Reyes Barberá et al.
Trends in Food Science and Technology, 2016, 60, ⟨10.1016/j.tifs.2016.10.017⟩
Journal articles hal-01454660v1
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Genome Sequence of a Toxin-Positive Clostridium difficile Strain Isolated from Murine Feces

Lucie Etienne-Mesmin , Benoit Chassaing , Oluwaseyi Adekunle , Lisa M. Mattei , Adrianne N. Edwards et al.
Genome Announcements, 2017, 5 (14), ⟨10.1128/genomeA.00088-17⟩
Journal articles hal-01658600v1
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Chloromethane formation and degradation in the fern phyllosphere

Nicole Jaeger , Ludovic Besaury , Amelie Ninja Röhling , Fabien Koch , Anne-Marie Delort et al.
Science of the Total Environment, 2018, 634, pp.1278-1287. ⟨10.1016/j.scitotenv.2018.03.316⟩
Journal articles hal-01801618v1
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Physicochemical and microbiological characteristics of kitoza, a traditional salted/dried/smoked meat product of Madagascar

Angela Ratsimba , Danielle Rakoto , Victor Louis Jeannoda , Hérizo Lalaina Andriamampianina , Régine Talon et al.
Food Sciences and Nutrition, 2019, 7 (8), pp.2666-2673. ⟨10.1002/fsn3.1122⟩
Journal articles hal-02320191v1
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Metatranscriptomics reveals the active bacterial and eukaryotic fibrolytic communities in the rumen of dairy cow fed a mixed diet

Sophie Marre , Nicolas Parisot , Pascale Lepercq , Frédérique Durand , Pascale Mosoni et al.
Frontiers in Microbiology, 2017, 8, pp.67-67. ⟨10.3389/fmicb.2017.00067⟩
Journal articles hal-01606055v1